Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890697.1_cds_XP_016445424.1_40382
CDS Infomation

[gene=LOC107770613] [db_xref=GeneID:107770613] [protein=uncharacterized protein LOC107770613] [protein_id=XP_016445424.1] [location=join(40662..40727,41533..41841,42487..42582,42687..42804,43174..44539,44642..44807,44885..45049,45144..45296,45698..45898)] [gbkey=CDS]
Sequence

ATGGCAATTGGTGTATTCTGTGGTGTGGTTCCTTTCATATTCCGCAGGAGGCCTTCTGAG
TTTAAGGAAGAAGACACACGTAAGACAAGGAGATTACATACTAGAGTAATAAAGAAATTA
CCTTCTATATTAGTATCAAGAAAATATAAAGCAGCCAAAGGTTCCAAAGTACGCAATTCA
TGTGGGGTGAAAACACCAAAAGCTGCAACTTGGCACAATTCAAGTGTGGCAAAAACAACA
AAAAGTCCAACTTTTCATAATTCATGTGGAGTAGCCAGCAACTTCAGAATAATGACAGAT
ATAAGAAACAAGATCCTCTCTTTGAGAGACTTGCTTGATCTTTCTCCTTGTGATGGCTCT
GAATCTGCAAATGAGCTGCTGATATCAACTCTGAGAGATCTGCATCAACTGTATCCTTCG
ATCAACCCGAATTTTTCATTGGCAAAAATTGATGGAACAGCAATACATGAGAAAGTGCGA
TGCTTTTGTGATATATTGAAATCAATCGGGGAAATGTGGACCGGAAATGATGAGTGGATG
GTCAAATGCAAAGAGAACTCACACAGTAAACTAAATGATTTTGAATATGTATCGGCATTG
CTCGAAGATATTATTAAGCTAGCTAGTGAAAGGATGATACAAATGACGGATGACGATGAG
GAGGACGATGAGGATGAGCATGAGGACAATTACGAGGATATTGAGGATGATCAAACCAGA
GATAGAAGTCCTTCACCTGATGCATTTGAGGAGGATATTGAGGATGATCAGACCACAGAA
AGAAGTCCTTCACCTGATGCATTTGAGAGAGATTTTTCCGAGTCTTATTCAAGCAACAAT
ACTTCTCTTTCGAGCTCTCCAACTTCAATTCTCCCCGAGATAATAACCAATGCTTCAAAG
AAGAATGCAAAGGCTTCTATCGCCGCGCCTCTTCGCCTATCACTCAAAGTCCAAGCAGTT
GGAAAGAAGAATCCAATTGAGGTAAAGCACCTGTCATTCCACATGTTTCCCAATGTAAAT
CAGGATTCAAATATAGAAGCAAAGCAAGATTTTGAATATAGTCAGGATTGTGAAATAGTG
GACTTGCCAGAGATTCTGCTGACTAACCTGGAGAATTTATCAGAAAATAGTGGAATATAT
TGGACTGGTGCATCAAATGGTCAACCCGTGCAAGCTCGTGTTACATTTGATGTGCTTTTA
CCTCCATCTTCAATTTCTAAGTTGCAATCAAATGTAACAGAACAGGCAGCAGTGCCACCT
TCTCCATACATTTTATCACCAAAAATTATAGAATCACAGGGACCAACAACAGCTGCACCT
GATTCCACGCTCTCACCAGAGAGCGAGGAATCAACACCATCGTCACCAGCGGCCCAACCT
ACTACATTAGGAAACAGCGTAACACCTCCACCTCCACCCCCACCTCCTCCGATTACATCG
AAAAATAGAGCAGTGCCTCCACCGCCGTTGCCGCCTCCAAGGAAATCAGAAATTGTACAT
TCATCTCCACCTCCACTTTCACCTCACAAAGGATTAAGGGGTATGGTAAGCTCACATCCA
CTTCCACCAAGGGCATCAAATGGAGCAACGCCAGCACCAGCACCACCTTCACCAAAGCCA
ATTGGAAAGGTAGCTGCACCTCCACCACCACCAATGCCAATGGGAAAGAGAGCTACACCT
CCACCATCACCACCTCCACCTATGGCAATGAAAAAAGGAGGTGCACCACCACCACCACCA
CCGGTGTTTGCAGGTGCCAAAAATCCACGACTTAAGAAAGCAGCCACTAAACTGAAAAGA
TCATCCCAAATGGGAAATCTTTATCGATCTCTTAAAGGAAAAGTTGAAGGATCTAGTTTA
GATGGTAAATCAAAAGGGGGAAAGGGAAAATTTAGCGCCGCATCAAAAGGAGGTAAACCA
GGAATGGCTGATGCATTAGCTGAGATGACAAGGAGGTCAGCATATTTCCAACAAATTGAA
GAGGATGTTAAAAATCATGCAAAAACAATAATGGAAATGAAGAAGGCCATTGCTTCTTTC
CATACATCAGATATGTCTGAGCTCATTAGATTCCACAATTATGTAGAGCTCCACCTTGAG
AAACTAACAGACGAATCTCAGGTGCTAGCAAGATTTGAAGATTTTCCTTTTAAGAAGTTG
GAAGCTTTGAGGACGGCAGCAACTCTCTATTCCAAGTTAAATTCAATAGTCTGTACTTTA
CAGAGTTGGCAACCGGCCTCGCCTGTTAGCCAACATCTTGCTAGAGCTGAGAGGTACTTC
AACAAGATAAAAGGAGACGTGGACTCTCTGGAAAGGACAAAAGATGAAGAATCCAAGAAA
TTAAAAACCCATAAAATCCATTTTGATTTCAGTATCCTTGTGCGCATCAAAGAATTGATG
GTCGATGTTTCCTCAAACTGTATGGAACTGGCAATAAAGGAAAAGAGAGAAGCAATGTCA
AGGGAAAAAGATGGAGCTGCACAAACAAATGAAGGGAGAGAAAAGGAATCAGCTCAACTG
CTTTGGAAGGCCTTTCAGTTTGCATTCAGAGTATATACTTTTGCTGGCGGGCATGATGAG
AGAGCAGAAAAGTTGACAAAAGAATTGGCTGAAGAAATCGAGACAGGCCTTCATCGTTAG

Peptide Sequence

PEP ID

XP_016445424.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107770613 [Nicotiana tabacum]
Sequence

MAIGVFCGVVPFIFRRRPSEFKEEDTRKTRRLHTRVIKKLPSILVSRKYKAAKGSKVRNS
CGVKTPKAATWHNSSVAKTTKSPTFHNSCGVASNFRIMTDIRNKILSLRDLLDLSPCDGS
ESANELLISTLRDLHQLYPSINPNFSLAKIDGTAIHEKVRCFCDILKSIGEMWTGNDEWM
VKCKENSHSKLNDFEYVSALLEDIIKLASERMIQMTDDDEEDDEDEHEDNYEDIEDDQTR
DRSPSPDAFEEDIEDDQTTERSPSPDAFERDFSESYSSNNTSLSSSPTSILPEIITNASK
KNAKASIAAPLRLSLKVQAVGKKNPIEVKHLSFHMFPNVNQDSNIEAKQDFEYSQDCEIV
DLPEILLTNLENLSENSGIYWTGASNGQPVQARVTFDVLLPPSSISKLQSNVTEQAAVPP
SPYILSPKIIESQGPTTAAPDSTLSPESEESTPSSPAAQPTTLGNSVTPPPPPPPPPITS
KNRAVPPPPLPPPRKSEIVHSSPPPLSPHKGLRGMVSSHPLPPRASNGATPAPAPPSPKP
IGKVAAPPPPPMPMGKRATPPPSPPPPMAMKKGGAPPPPPPVFAGAKNPRLKKAATKLKR
SSQMGNLYRSLKGKVEGSSLDGKSKGGKGKFSAASKGGKPGMADALAEMTRRSAYFQQIE
EDVKNHAKTIMEMKKAIASFHTSDMSELIRFHNYVELHLEKLTDESQVLARFEDFPFKKL
EALRTAATLYSKLNSIVCTLQSWQPASPVSQHLARAERYFNKIKGDVDSLERTKDEESKK
LKTHKIHFDFSILVRIKELMVDVSSNCMELAIKEKREAMSREKDGAAQTNEGREKESAQL
LWKAFQFAFRVYTFAGGHDERAEKLTKELAEEIETGLHR

Transcript Sequence

Gene sequence data has not been registered.